STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57186.1PFAM: Domain of Unknown Function (DUF928). (251 aa)    
Predicted Functional Partners:
AFY57184.1
Putative transmembrane sensor domain protein; PFAM: CHASE2 domain.
  
     0.770
AFY55529.1
Putative transmembrane sensor domain protein; PFAM: CHASE2 domain.
 
     0.760
AFY57185.1
PFAM: Sigma-70, region 4; Response regulator receiver domain.
 
     0.760
AFY58692.1
PFAM: Domain of Unknown Function (DUF928).
  
    0.759
AFY56150.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
     0.751
AFY55528.1
PFAM: Response regulator receiver domain.
  
     0.721
AFY58505.1
PFAM: Domain of Unknown Function (DUF928).
  
    0.713
AFY53162.1
PFAM: Adenylate and Guanylate cyclase catalytic domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain.
 
  
 0.702
AFY57083.1
Hypothetical protein.
  
 
   0.701
AFY52775.1
NB-ARC domain-containing protein; PFAM: NB-ARC domain.
  
     0.692
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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