STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57397.1Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase. (676 aa)    
Predicted Functional Partners:
AFY54956.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.969
AFY57436.1
PFAM: Type I restriction modification DNA specificity domain.
 
 
 0.967
AFY57437.1
Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
 
 0.965
AFY57400.1
PFAM: Protein kinase domain; Nuclease-related domain.
 
     0.912
AFY57398.1
Putative ATPase.
 
     0.853
AFY57402.1
Hypothetical protein.
 
     0.835
AFY57399.1
PFAM: Type I restriction modification DNA specificity domain.
      0.785
AFY54953.1
Helicase, type I site-specific restriction-modification system restriction subunit; PFAM: Type I restriction enzyme R protein N terminus (HSDR_N); Uncharacterized conserved protein (DUF2081); EcoEI R protein C-terminal; Type III restriction enzyme, res subunit.
 
   
 0.756
AFY57435.1
PFAM: N-6 DNA Methylase; HsdM N-terminal domain; TIGRFAM: type I restriction system adenine methylase (hsdM).
  
     0.749
AFY54957.1
Type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA Methylase; HsdM N-terminal domain.
  
     0.735
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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