STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57414.1Putative transmembrane sensor domain protein; PFAM: CHASE2 domain. (786 aa)    
Predicted Functional Partners:
AFY57413.1
PFAM: Protein of unknown function (DUF1822).
 
     0.903
AFY54232.1
PFAM: Domain of Unknown Function (DUF928).
  
     0.713
AFY58022.1
PFAM: Protein of unknown function (DUF1822).
  
     0.698
AFY56416.1
PFAM: Protein of unknown function (DUF1822).
  
     0.689
AFY54225.1
PFAM: Protein of unknown function (DUF1822).
  
     0.685
AFY55577.1
P pilus assembly/Cpx signaling pathway, periplasmic inhibitor/zinc-resistance associated protein; PFAM: LTXXQ motif.
  
     0.685
AFY58747.1
Hypothetical protein.
  
     0.684
AFY56154.1
PFAM: Protein of unknown function (DUF1822).
  
     0.674
AFY58580.1
PFAM: Domain of Unknown Function (DUF928).
  
     0.674
AFY58585.1
PFAM: Protein of unknown function (DUF1822).
  
     0.672
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.