STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57432.1HIRAN domain-containing protein; PFAM: HIRAN domain. (257 aa)    
Predicted Functional Partners:
AFY57433.1
Hypothetical protein.
 
   
 0.955
AFY57060.1
DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: Dynamin family; DnaJ domain.
  
     0.718
AFY57252.1
Hypothetical protein.
  
     0.694
AFY53549.1
Outer membrane protein/peptidoglycan-associated (lipo)protein; PFAM: Putative phospholipid-binding domain; OmpA family.
  
     0.663
AFY54054.1
Hypothetical protein.
  
     0.570
AFY57628.1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
  
     0.566
AFY56939.1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
  
     0.557
AFY56154.1
PFAM: Protein of unknown function (DUF1822).
  
     0.555
AFY56413.1
Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase.
  
     0.543
AFY57431.1
PFAM: Uncharacterized protein conserved in bacteria (DUF2186).
       0.496
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.