STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57628.1Monoamine oxidase; PFAM: Flavin containing amine oxidoreductase. (503 aa)    
Predicted Functional Partners:
AFY57252.1
Hypothetical protein.
  
     0.773
AFY54754.1
DNA/RNA helicase, superfamily II, SNF2 family; PFAM: Helicase conserved C-terminal domain; SNF2 family N-terminal domain.
    
 0.751
AFY56411.1
Putative naringenin-chalcone synthase; PFAM: Chalcone and stilbene synthases, N-terminal domain; Chalcone and stilbene synthases, C-terminal domain.
  
 
 
 0.748
AFY57251.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
  
   
 0.733
AFY55010.1
DNA/RNA helicase, superfamily II, SNF2 family; PFAM: SNF2 Helicase protein; Helicase conserved C-terminal domain; SNF2 family N-terminal domain; TIGRFAM: intein N-terminal splicing region; intein C-terminal splicing region.
    
 0.684
AFY57394.1
Putative Zn peptidase; PFAM: Uncharacterised protein family (UPF0175); Domain of unknown function (DUF955).
  
     0.678
AFY54527.1
Deacetylase, histone deacetylase/acetoin utilization protein; PFAM: Histone deacetylase domain.
    
 0.651
AFY56039.1
Deacetylase, histone deacetylase/acetoin utilization protein; PFAM: Histone deacetylase domain.
    
 0.651
AFY56406.1
Arabinose efflux permease family protein; PFAM: Major Facilitator Superfamily.
  
     0.615
AFY57433.1
Hypothetical protein.
  
     0.586
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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