STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57710.1PFAM: Acetyltransferase (GNAT) family. (150 aa)    
Predicted Functional Partners:
AFY58532.1
Hypothetical protein; PFAM: Sucrase/ferredoxin-like.
  
     0.627
AFY55776.1
Hypothetical protein.
  
     0.601
AFY57711.1
Arginase family hydrolase, arginase/agmainase/formiminoglutamate hydrolase; PFAM: Arginase family; Belongs to the arginase family.
 
    0.585
AFY54412.1
Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Rieske [2Fe-2S] domain.
  
     0.520
argG
PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.
  
  
 0.473
AFY55492.1
Hypothetical protein.
  
    0.469
AFY58410.1
PFAM: Disaggregatase related.
  
     0.454
AFY57771.1
Hypothetical protein.
  
    0.448
AFY56355.1
Subtilisin-like serine protease; PFAM: Subtilase family.
  
     0.432
AFY58482.1
PFAM: GUN4-like.
  
     0.432
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.