STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57755.1PFAM: Glycosyl transferase family 2. (309 aa)    
Predicted Functional Partners:
AFY54529.1
PFAM: Glycosyl transferase family 2.
 
     0.788
AFY57756.1
PFAM: Glycosyl transferase family 2.
     0.771
AFY53416.1
PFAM: Glycosyl transferase family 2.
  
     0.750
AFY53348.1
PFAM: Transmembrane exosortase (Exosortase_EpsH); TIGRFAM: exosortase/archaeosortase family protein; cyanoexosortase B; exosortase.
 
     0.742
AFY54924.1
Hypothetical protein.
  
     0.737
AFY56180.1
PFAM: Glycosyl transferase family 2.
  
     0.733
AFY58280.1
PFAM: Glycosyl transferase family 2.
  
     0.682
AFY53059.1
PFAM: Glycosyl transferase family 2.
  
     0.669
AFY57714.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.639
AFY58061.1
Glycosyltransferase; PFAM: Glycosyl transferases group 1.
  
     0.636
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.