STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY57766.1PFAM: Tetratricopeptide repeat. (180 aa)    
Predicted Functional Partners:
AFY57081.1
PFAM: Protein of unknown function (DUF3007).
  
     0.721
AFY53913.1
PFAM: Protein of unknown function (DUF3531).
  
     0.685
AFY53708.1
PFAM: Predicted membrane protein (DUF2232).
  
     0.636
AFY55598.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat; Surface antigen; POTRA domain, ShlB-type; TIGRFAM: chloroplast envelope protein translocase, IAP75 family.
  
     0.635
AFY57876.1
PFAM: PRC-barrel domain.
  
     0.632
AFY57684.1
PFAM: Protein of unknown function (DUF3353).
  
     0.598
AFY55121.1
Outer membrane protein/protective antigen OMA87; PFAM: Surface antigen variable number repeat; POTRA domain, ShlB-type; Surface antigen; TIGRFAM: chloroplast envelope protein translocase, IAP75 family.
  
     0.583
AFY55338.1
PFAM: Tetratricopeptide repeat.
  
     0.567
AFY53631.1
PFAM: Protein of unknown function (DUF1997).
  
     0.561
AFY58403.1
PFAM: Glutaredoxin-like domain (DUF836).
  
     0.560
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.