STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58004.1PFAM: Histidine kinase; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase. (424 aa)    
Predicted Functional Partners:
AFY58003.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.972
AFY55403.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.864
AFY55575.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.845
AFY55602.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
   0.845
AFY56462.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.833
AFY52843.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.832
AFY53604.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.832
AFY55228.1
PFAM: Response regulator receiver domain; Bacterial regulatory proteins, luxR family.
 
   0.831
AFY53962.1
PFAM: Response regulator receiver domain.
  
   0.760
AFY58428.1
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; PFAM: Bacterial regulatory proteins, luxR family.
  
   0.669
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
Server load: low (26%) [HD]