STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58325.1Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Rieske [2Fe-2S] domain. (364 aa)    
Predicted Functional Partners:
AFY58326.1
Hypothetical protein.
 
     0.865
AFY58318.1
Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily.
 
     0.787
AFY58317.1
Hypothetical protein; PFAM: Bacterial transferase hexapeptide (three repeats).
 
     0.780
AFY58316.1
PFAM: GH3 auxin-responsive promoter.
 
     0.778
AFY57992.1
PFAM: PAP_fibrillin.
  
     0.571
AFY54162.1
PFAM: Tic22-like family.
  
   
 0.560
AFY58324.1
Hypothetical protein.
       0.466
AFY55139.1
Hypothetical protein.
  
     0.457
AFY58319.1
Ring-hydroxylating dioxygenase, large terminal subunit; PFAM: Rieske [2Fe-2S] domain.
 
    
0.436
AFY56215.1
PFAM: Cytochrome P450.
  
     0.423
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.