STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58390.1Putative flavoprotein; PFAM: Metallo-beta-lactamase superfamily; Flavin reductase like domain. (577 aa)    
Predicted Functional Partners:
AFY55590.1
Hypothetical protein.
 
     0.774
AFY56200.1
Hypothetical protein.
  
     0.745
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.739
AFY56642.1
Hypothetical protein.
  
     0.734
AFY59199.1
Hypothetical protein.
  
     0.722
AFY55140.1
PFAM: Protein of unknown function (DUF3172).
  
     0.720
AFY53526.1
PFAM: Rubredoxin; Belongs to the rubredoxin family.
 
  
 0.706
AFY57081.1
PFAM: Protein of unknown function (DUF3007).
  
     0.676
AFY55200.1
PFAM: Tryptophan-rich protein (DUF2389); TIGRFAM: tryptophan-rich conserved hypothetical protein.
  
     0.671
AFY53249.1
PFAM: Ycf66 protein N-terminus.
  
     0.647
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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