Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFY53361.1 | AFY53946.1 | Riv7116_0774 | Riv7116_1382 | Hypothetical protein. | Hypothetical protein. | 0.462 |
| AFY53361.1 | polA | Riv7116_0774 | Riv7116_1199 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
| AFY53361.1 | sbcD | Riv7116_0774 | Riv7116_6050 | Hypothetical protein. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.745 |
| AFY53946.1 | AFY53361.1 | Riv7116_1382 | Riv7116_0774 | Hypothetical protein. | Hypothetical protein. | 0.462 |
| AFY53946.1 | AFY56000.1 | Riv7116_1382 | Riv7116_3548 | Hypothetical protein. | Hypothetical protein. | 0.544 |
| AFY53946.1 | AFY57978.1 | Riv7116_1382 | Riv7116_5609 | Hypothetical protein. | NurA domain-containing protein; PFAM: NurA domain. | 0.441 |
| AFY53946.1 | polA | Riv7116_1382 | Riv7116_1199 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.954 |
| AFY53946.1 | sbcD | Riv7116_1382 | Riv7116_6050 | Hypothetical protein. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.771 |
| AFY54546.1 | AFY55070.1 | Riv7116_2009 | Riv7116_2562 | TIGRFAM: exonuclease SbcC. | Hypothetical protein. | 0.782 |
| AFY54546.1 | AFY55784.1 | Riv7116_2009 | Riv7116_3321 | TIGRFAM: exonuclease SbcC. | Putative ATPase; PFAM: Domain of unknown function DUF87. | 0.774 |
| AFY54546.1 | AFY57978.1 | Riv7116_2009 | Riv7116_5609 | TIGRFAM: exonuclease SbcC. | NurA domain-containing protein; PFAM: NurA domain. | 0.782 |
| AFY54546.1 | polA | Riv7116_2009 | Riv7116_1199 | TIGRFAM: exonuclease SbcC. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
| AFY54546.1 | sbcD | Riv7116_2009 | Riv7116_6050 | TIGRFAM: exonuclease SbcC. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.944 |
| AFY54909.1 | polA | Riv7116_2393 | Riv7116_1199 | TIGRFAM: DNA sulfur modification protein DndD. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
| AFY54909.1 | sbcD | Riv7116_2393 | Riv7116_6050 | TIGRFAM: DNA sulfur modification protein DndD. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.745 |
| AFY54915.1 | polA | Riv7116_2399 | Riv7116_1199 | TIGRFAM: DNA sulfur modification protein DndD. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.880 |
| AFY54915.1 | sbcD | Riv7116_2399 | Riv7116_6050 | TIGRFAM: DNA sulfur modification protein DndD. | Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. | 0.745 |
| AFY55070.1 | AFY54546.1 | Riv7116_2562 | Riv7116_2009 | Hypothetical protein. | TIGRFAM: exonuclease SbcC. | 0.782 |
| AFY55070.1 | AFY55784.1 | Riv7116_2562 | Riv7116_3321 | Hypothetical protein. | Putative ATPase; PFAM: Domain of unknown function DUF87. | 0.784 |
| AFY55070.1 | AFY57978.1 | Riv7116_2562 | Riv7116_5609 | Hypothetical protein. | NurA domain-containing protein; PFAM: NurA domain. | 0.798 |
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