STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58537.1DNA-binding domain-containing protein, AraC-type. (328 aa)    
Predicted Functional Partners:
AFY58536.1
Outer membrane receptor protein; PFAM: TonB-dependent Receptor Plug Domain; TonB dependent receptor; Localisation of periplasmic protein complexes.
 
   
 0.793
AFY53326.1
DNA-binding domain-containing protein, AraC-type.
  
     0.675
AFY57993.1
DNA-binding domain-containing protein, AraC-type.
  
     0.670
AFY56850.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
 
 0.666
AFY53410.1
DNA-binding domain-containing protein, AraC-type.
  
     0.656
AFY57835.1
DNA-binding domain-containing protein, AraC-type.
  
     0.652
AFY53702.1
DNA-binding domain-containing protein, AraC-type.
  
     0.651
AFY54413.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.648
AFY57778.1
Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
  
     0.639
AFY58513.1
Outer membrane receptor protein; PFAM: TonB dependent receptor; TonB-dependent Receptor Plug Domain; Localisation of periplasmic protein complexes.
  
   
 0.589
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
Server load: low (28%) [HD]