STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58624.1PFAM: Domain of Unknown Function (DUF928). (258 aa)    
Predicted Functional Partners:
AFY56985.1
Hypothetical protein.
  
     0.686
AFY58017.1
Putative transmembrane sensor domain protein; PFAM: CHASE2 domain.
  
     0.681
AFY58584.1
Putative transmembrane sensor domain protein; PFAM: CHASE2 domain.
  
     0.675
AFY57186.1
PFAM: Domain of Unknown Function (DUF928).
  
    0.669
AFY55058.1
PFAM: Protein of unknown function (DUF1232).
  
     0.666
AFY56729.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
     0.664
AFY53461.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
     0.661
AFY54833.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
     0.661
AFY54834.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
     0.661
AFY58601.1
PFAM: haemagglutination activity domain; TIGRFAM: filamentous hemagglutinin family N-terminal domain.
  
     0.652
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.