STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58709.1Hypothetical protein. (80 aa)    
Predicted Functional Partners:
AFY58708.1
PFAM: Serine acetyltransferase, N-terminal; Bacterial transferase hexapeptide (three repeats); TIGRFAM: serine O-acetyltransferase.
       0.799
AFY53011.1
Hypothetical protein; Manually curated.
  
     0.750
AFY53963.1
Hypothetical protein.
  
     0.727
AFY52997.1
DNA-binding ferritin-like protein (oxidative damage protectant); PFAM: Ferritin-like domain; Belongs to the Dps family.
 
     0.704
AFY58264.1
Hypothetical protein.
  
     0.698
AFY56000.1
Hypothetical protein.
  
     0.695
AFY54547.1
Hypothetical protein.
  
     0.694
AFY54137.1
PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD.
  
     0.681
AFY53710.1
Hypothetical protein.
  
     0.663
AFY53631.1
PFAM: Protein of unknown function (DUF1997).
  
     0.659
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.