STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY58992.1Rieske (2Fe-2S) domain-containing protein; PFAM: Rieske [2Fe-2S] domain. (316 aa)    
Predicted Functional Partners:
AFY58439.1
PFAM: Bacterial regulatory proteins, tetR family.
  
     0.676
AFY55434.1
PFAM: Domain of Unknown Function (DUF928).
  
     0.672
AFY58482.1
PFAM: GUN4-like.
  
     0.639
AFY58993.1
Transposase; PFAM: Bacterial regulatory proteins, tetR family.
 
     0.635
AFY56189.1
Hypothetical protein.
  
     0.628
AFY52852.1
Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin; PFAM: Phytanoyl-CoA dioxygenase (PhyH).
  
     0.596
AFY56188.1
Hypothetical protein.
  
     0.593
AFY57771.1
Hypothetical protein.
  
     0.593
AFY57027.1
Hypothetical protein.
  
     0.571
AFY56101.1
PFAM: BNR/Asp-box repeat.
  
     0.567
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.