STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFY59006.1Putative glycosyltransferase; PFAM: Glycosyl transferase family 2. (881 aa)    
Predicted Functional Partners:
AFY59007.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
  
 0.827
AFY59008.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component; PFAM: ABC transporter.
 
  
 0.817
AFY59005.1
PFAM: Glycosyl transferase family 2.
     0.726
AFY59004.1
Hypothetical protein.
       0.624
AFY59003.1
Protoporphyrinogen oxidase; PFAM: Flavin containing amine oxidoreductase.
  
    0.570
AFY58268.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
  
 0.561
AFY55073.1
Nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase.
 
  
 0.542
AFY59002.1
Putative glycosyltransferase; PFAM: Glycosyl transferase family 2; Predicted glycosyltransferase involved in capsule biosynthesis.
 
    
0.497
AFY55788.1
PFAM: Glycosyl transferase family 2.
 
     0.483
AFY56184.1
ABC-type polysaccharide/polyol phosphate export systems, permease component; PFAM: ABC-2 type transporter.
 
  
 0.479
Your Current Organism:
Rivularia sp. PCC7116
NCBI taxonomy Id: 373994
Other names: Calothrix sp. ATCC 29111, Calothrix sp. PCC 7116, R. sp. PCC 7116, Rivularia sp. LIP, Rivularia sp. PCC 7116
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.