STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribLCytidyltransferase-related domain protein; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (147 aa)    
Predicted Functional Partners:
Kcr_0996
PFAM: protein of unknown function DUF120; KEGG: afu:AF2106 putative transcriptional regulator.
     
 0.923
Kcr_0661
PFAM: protein of unknown function UPF0047; KEGG: hbu:Hbut_1123 universally conserved protein.
      0.734
Kcr_0064
PFAM: phosphoesterase DHHA1; KEGG: pis:Pisl_0429 transcriptional regulator, fis family.
       0.560
Kcr_0118
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pfu:PF0462 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
 
  
 0.527
Kcr_1522
DNA-directed RNA polymerase subunit A; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
      
 0.501
Kcr_1087
TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase; KEGG: sai:Saci_0820 6,7-dimethyl-8-ribityllumazine synthase.
  
  
 0.492
Kcr_0641
TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein TPP binding domain protein; KEGG: pcl:Pcal_1753 acetolactate synthase, large subunit, biosynthetic type.
  
  
 0.465
Kcr_1161
PFAM: phosphatidate cytidylyltransferase; KEGG: pis:Pisl_0735 hypothetical protein.
   
 
 0.428
Kcr_1306
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: msi:Msm_0853 UDP-N-acetylglucosamine 2-epimerase, WecB.
     
 0.402
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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