STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0482ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; KEGG: hbu:Hbut_1453 predicted ABC transporter. (297 aa)    
Predicted Functional Partners:
Kcr_0483
ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: hbu:Hbut_1452 predicted transporter.
 
 
 0.999
Kcr_0484
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: hbu:Hbut_1451 nitrate transport ATP-binding protein.
 
  
 0.981
Kcr_0741
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mta:Moth_0406 ABC transporter related.
 
  
 0.907
Kcr_0486
TIGRFAM: 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: ape:APE_1570 4-hydroxybenzoate octaprenyl transferase.
     
 0.808
Kcr_0485
TIGRFAM: UbiD family decarboxylase; PFAM: Carboxylyase-related protein; KEGG: sso:SSO0879 hypothetical protein.
       0.799
Kcr_0481
PFAM: asparagine synthase; ExsB family protein; PP-loop domain protein; KEGG: afu:AF1556 hypothetical protein.
       0.622
Kcr_0480
PFAM: protein of unknown function DUF111; KEGG: mth:MTH1109 hypothetical protein; Belongs to the LarC family.
       0.616
Kcr_0479
PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: rrs:RoseRS_1341 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase.
     
 0.518
Kcr_0111
Phosphoadenosine phosphosulfate reductase; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; phosphoadenosine phosphosulfate reductase; KEGG: tpe:Tpen_0665 phosphoadenosine phosphosulfate reductase.
  
  
 0.512
Kcr_0317
KEGG: pth:PTH_1008 phosphoenolpyruvate carboxykinase.
 
     0.455
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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