Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Kcr_0623 | Kcr_0624 | ATPase; KEGG: tpe:Tpen_1130 ATPase. | ATPase; PFAM: DUF234 DEXX-box ATPase; ATPase; KEGG: pfu:PF0304 DEXX-box ATPase. | 0.558 |
Kcr_0623 | Kcr_0625 | ATPase; KEGG: tpe:Tpen_1130 ATPase. | KEGG: tpe:Tpen_1386 methyltransferase type 12. | 0.496 |
Kcr_0624 | Kcr_0623 | ATPase; PFAM: DUF234 DEXX-box ATPase; ATPase; KEGG: pfu:PF0304 DEXX-box ATPase. | ATPase; KEGG: tpe:Tpen_1130 ATPase. | 0.558 |
Kcr_0624 | Kcr_0625 | ATPase; PFAM: DUF234 DEXX-box ATPase; ATPase; KEGG: pfu:PF0304 DEXX-box ATPase. | KEGG: tpe:Tpen_1386 methyltransferase type 12. | 0.679 |
Kcr_0625 | Kcr_0623 | KEGG: tpe:Tpen_1386 methyltransferase type 12. | ATPase; KEGG: tpe:Tpen_1130 ATPase. | 0.496 |
Kcr_0625 | Kcr_0624 | KEGG: tpe:Tpen_1386 methyltransferase type 12. | ATPase; PFAM: DUF234 DEXX-box ATPase; ATPase; KEGG: pfu:PF0304 DEXX-box ATPase. | 0.679 |