Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Kcr_0747 | Kcr_0748 | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | KEGG: pho:PH0317.1n hypothetical protein. | 0.539 |
Kcr_0747 | Kcr_0749 | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | KEGG: afu:AF0610m hypothetical protein. | 0.543 |
Kcr_0747 | Kcr_0750 | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | 0.525 |
Kcr_0748 | Kcr_0747 | KEGG: pho:PH0317.1n hypothetical protein. | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | 0.539 |
Kcr_0748 | Kcr_0749 | KEGG: pho:PH0317.1n hypothetical protein. | KEGG: afu:AF0610m hypothetical protein. | 0.792 |
Kcr_0748 | Kcr_0750 | KEGG: pho:PH0317.1n hypothetical protein. | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | 0.752 |
Kcr_0749 | Kcr_0747 | KEGG: afu:AF0610m hypothetical protein. | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | 0.543 |
Kcr_0749 | Kcr_0748 | KEGG: afu:AF0610m hypothetical protein. | KEGG: pho:PH0317.1n hypothetical protein. | 0.792 |
Kcr_0749 | Kcr_0750 | KEGG: afu:AF0610m hypothetical protein. | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | 0.752 |
Kcr_0750 | Kcr_0747 | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pis:Pisl_1034 threonyl/alanyl tRNA synthetase, SAD. | 0.525 |
Kcr_0750 | Kcr_0748 | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | KEGG: pho:PH0317.1n hypothetical protein. | 0.752 |
Kcr_0750 | Kcr_0749 | Hypothetical protein; KEGG: tpe:Tpen_1542 paREP7. | KEGG: afu:AF0610m hypothetical protein. | 0.752 |