STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pdxTSNO glutamine amidotransferase; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (197 aa)    
Predicted Functional Partners:
Kcr_0774
PFAM: Vitamin B6 biosynthesis protein; thiazole biosynthesis family protein; KEGG: pas:Pars_0228 vitamin B6 biosynthesis protein; Belongs to the PdxS/SNZ family.
 0.999
Kcr_1208
PFAM: PfkB domain protein; KEGG: pis:Pisl_1117 PfkB domain protein.
    
 0.844
rpiA
Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
     
 0.803
Kcr_1210
KEGG: mth:MTH784 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase; Belongs to the ribose-phosphate pyrophosphokinase family.
    
  0.801
Kcr_1498
PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: pho:PH0923 phosphomannomutase; Belongs to the phosphohexose mutase family.
     
  0.800
Kcr_1130
TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: glutamine amidotransferase class-I; GMP synthase domain protein; thiamine biosynthesis protein; KEGG: pcl:Pcal_1723 GMP synthase, large subunit.
     
 0.563
Kcr_0772
PFAM: Radical SAM domain protein; KEGG: afu:AF1125 heme biosynthesis protein (NirJ-1).
       0.519
Kcr_0773
PFAM: Radical SAM domain protein; KEGG: hbu:Hbut_0035 Fe-S oxidoreductase - arylsulfatase regulator AslB.
       0.519
Kcr_0771
Hypothetical protein.
       0.515
Kcr_0776
Selenocysteine lyase/Cysteine desulfurase; PFAM: aminotransferase class V; KEGG: mse:Msed_0737 aminotransferase, class V.
       0.494
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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