STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0830PFAM: aminotransferase class-III; KEGG: aba:Acid345_1532 aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (434 aa)    
Predicted Functional Partners:
Kcr_0497
PFAM: aldehyde dehydrogenase; KEGG: sto:ST1116 methylmalonate-semialdehyde dehydrogenase.
 
 0.950
Kcr_0081
PFAM: aminotransferase class-III; KEGG: tpe:Tpen_0539 acetylornithine transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.905
Kcr_1227
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: smr:Smar_1448 pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit.
    
  0.802
Kcr_1291
TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase, delta subunit; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sso:SSO7412 pyruvate synthase delta chain (pyruvic-ferredoxin oxidoreductase delta chain) (PorD-1).
    
  0.802
Kcr_0115
KEGG: hbu:Hbut_1337 hypothetical protein.
    
  0.801
Kcr_1226
KEGG: det:DET0724 pyruvic-ferredoxin oxidoreductase, gamma subunit; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase.
    
  0.801
Kcr_1228
Pyruvate:ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: smr:Smar_1449 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
    
  0.801
Kcr_1229
Pyruvate:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: smr:Smar_1450 thiamine pyrophosphate enzyme domain protein TPP-binding.
    
 0.801
Kcr_1292
2-oxoacid:ferredoxin oxidoreductase, alpha subunit; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Transketolase domain protein; KEGG: tvo:TVN0835 pyruvate ferredoxin oxidoreductase, alpha subunit.
    
  0.801
Kcr_1293
2-oxoacid:ferredoxin oxidoreductase, beta subunit; PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sai:Saci_2253 pyruvate synthase beta chain.
    
 0.801
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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