STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0926PFAM: glycosyl transferase group 1; KEGG: mhu:Mhun_0395 glycosyl transferase, group 1. (357 aa)    
Predicted Functional Partners:
Kcr_0925
PFAM: Radical SAM domain protein; KEGG: pab:PAB1859 pyruvate formate-lyase activating enzyme related protein (act-like).
       0.775
Kcr_0848
dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.
  
  
 0.682
Kcr_1403
PFAM: glycosyl transferase group 1; KEGG: mja:MJ1178 hypothetical protein.
  
     0.658
Kcr_1379
PFAM: Nucleotidyl transferase; KEGG: mmp:MMP1076 bacterial transferase hexapeptide repeat:ADP-glucose pyrophosphorylase.
 
 
 0.652
Kcr_0924
Hypothetical protein.
       0.630
Kcr_0846
TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: ape:APE_1180 dTDP-glucose 4,6-dehydratase.
  
  
 0.587
Kcr_0672
Glycosyltransferase; PFAM: glycosyl transferase family 2; KEGG: mem:Memar_2396 glycosyl transferase, family 2.
 
  
 0.582
Kcr_1306
PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: msi:Msm_0853 UDP-N-acetylglucosamine 2-epimerase, WecB.
  
  
 0.516
Kcr_0365
PFAM: polysaccharide biosynthesis protein; KEGG: oligosaccharide repeat unit transporter.
  
  
 0.509
Kcr_0849
PFAM: polysaccharide biosynthesis protein; virulence factor MVIN family protein; KEGG: tpe:Tpen_1738 polysaccharide biosynthesis protein.
  
  
 0.509
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.