STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0933ABC-type oligopeptide transport system, ATPase component; KEGG: ttj:TTHA0473 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase. (323 aa)    
Predicted Functional Partners:
Kcr_0930
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: drm:Dred_2453 binding-protein-dependent transport systems inner membrane component.
 
 
 0.986
Kcr_0932
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; KEGG: tpt:Tpet_0419 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
 
 
0.986
Kcr_0931
ABC-type dipeptide/oligopeptide/nickel transport system, permease component; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rsq:Rsph17025_0374 binding-protein-dependent transport systems inner membrane component.
 
 
 0.985
Kcr_1095
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ape:APE_0302.1 putative oligopeptide transport system permease protein.
 
 0.949
Kcr_0508
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afu:AF1769 dipeptide transport system permease protein.
 
 
 0.937
Kcr_0929
ABC-type dipeptide transport system, periplasmic component; PFAM: extracellular solute-binding protein family 5; KEGG: rsh:Rsph17029_2465 extracellular solute-binding protein, family 5.
 
 
 0.764
Kcr_1096
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; KEGG: pho:PH1412 putative dipeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
   
0.470
Kcr_0507
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; KEGG: afu:AF1770 dipeptide transport system ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
   
0.469
Kcr_1062
ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; KEGG: tpe:Tpen_0146 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase.
 
   
0.467
Kcr_0509
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: afu:AF1768 dipeptide transport system permease protein.
 
  
 0.449
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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