STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_0959KEGG: mac:MA0813 hypothetical protein. (465 aa)    
Predicted Functional Partners:
Kcr_0958
Hypothetical protein.
       0.636
Kcr_0960
PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: pcl:Pcal_1661 threonyl/alanyl tRNA synthetase, SAD.
       0.564
Kcr_0961
PFAM: metallophosphoesterase; SMART: serine/threonine-specific protein phosphatase and bis(5-nucleosyl)-tetraphosphatase; KEGG: tpe:Tpen_0334 bis(5'nucleosyl)-tetraphosphatase, ApaH.
  
    0.545
Kcr_0963
PFAM: Abortive infection protein; KEGG: cac:CAC0420 conserved membrane protein, possible homolog of CaaX-like membrane endopeptidase.
  
    0.545
Kcr_0962
Redoxin domain protein; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: pvi:Cvib_0026 redoxin domain protein.
     
 0.539
Kcr_0957
PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pfu:PF1017 hypothetical protein.
       0.455
Kcr_0956
Hypothetical protein.
       0.450
speE
Spermine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.
       0.417
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.