STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_1051PFAM: amino acid-binding ACT domain protein; KEGG: mse:Msed_0342 ACT domain-containing protein; Belongs to the UPF0237 family. (93 aa)    
Predicted Functional Partners:
Kcr_1052
PFAM: protein of unknown function DUF711; KEGG: pas:Pars_1033 protein of unknown function DUF711.
 
     0.936
Kcr_1054
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; FAD dependent oxidoreductase; KEGG: tko:TK2100 thioredoxin reductase.
       0.784
Kcr_1053
PFAM: protein of unknown function DUF437; KEGG: neq:NEQ158 conserved hypothetical protein.
       0.773
Kcr_1049
PFAM: Acetamidase/Formamidase; KEGG: pfu:PF1099 putative formamidase (formamide amidohydrolase).
       0.510
Kcr_1050
PFAM: amino acid permease-associated region; KEGG: sso:SSO2726 amino acid transporter, putative.
       0.510
Kcr_1055
PFAM: protein of unknown function DUF711; KEGG: tpe:Tpen_0437 protein of unknown function DUF711.
 
     0.454
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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