STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Kcr_1470PFAM: Glycosyltransferase 28 domain; KEGG: mja:MJ1255 hypothetical protein. (386 aa)    
Predicted Functional Partners:
Kcr_1469
PFAM: AMMECR1 domain protein; KEGG: mka:MK0488 hypothetical protein.
  
    0.825
Kcr_0566
KEGG: tpe:Tpen_0807 hypothetical protein.
  
     0.586
Kcr_0565
KEGG: tpe:Tpen_0807 hypothetical protein.
  
     0.573
tpiA
Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
       0.561
Kcr_0843
PFAM: glycosyl transferase family 2; KEGG: pth:PTH_1084 predicted glycosyltransferases.
 
  
 0.555
Kcr_1241
KEGG: tpe:Tpen_0544 membrane protein-like.
 
     0.447
Kcr_1391
Geranylgeranylglyceryl phosphate synthase; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P). This reaction is the first ether-bond-formation step in the biosynthesis of archaeal membrane lipids.
  
     0.445
Kcr_0408
All-trans-retinol 13,14-reductase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rpb:RPB_0096 FAD dependent oxidoreductase.
     
 0.423
Your Current Organism:
Korarchaeum cryptofilum
NCBI taxonomy Id: 374847
Other names: C. Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum OPF8, Candidatus Korarchaeum cryptofilum str. OPF8, Candidatus Korarchaeum cryptofilum strain OPF8, Korarchaeum cryptofilum OPF8, korarchaeote OPF1-KOR
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