Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG06786.1 | APG06787.1 | BKD09_RS00460 | BKD09_RS00465 | Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | 0.526 |
| APG06786.1 | APG14146.1 | BKD09_RS00460 | BKD09_RS37910 | Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.634 |
| APG06787.1 | APG06786.1 | BKD09_RS00465 | BKD09_RS00460 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.526 |
| APG06787.1 | APG06788.1 | BKD09_RS00465 | BKD09_RS00470 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.469 |
| APG06787.1 | APG08209.1 | BKD09_RS00465 | BKD09_RS07705 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.959 |
| APG06787.1 | APG09146.1 | BKD09_RS00465 | BKD09_RS12450 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.946 |
| APG06787.1 | APG14146.1 | BKD09_RS00465 | BKD09_RS37910 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
| APG06787.1 | cysC | BKD09_RS00465 | BKD09_RS45170 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.450 |
| APG06787.1 | eno | BKD09_RS00465 | BKD09_RS25575 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.440 |
| APG06787.1 | gcvP | BKD09_RS00465 | BKD09_RS20925 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.494 |
| APG06787.1 | gltD | BKD09_RS00465 | BKD09_RS07700 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.994 |
| APG06787.1 | guaA | BKD09_RS00465 | BKD09_RS30275 | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | Glutamine-hydrolyzing GMP synthase; Catalyzes the synthesis of GMP from XMP. | 0.561 |
| APG06788.1 | APG06787.1 | BKD09_RS00470 | BKD09_RS00465 | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | 0.469 |
| APG08209.1 | APG06787.1 | BKD09_RS07705 | BKD09_RS00465 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | FMN-binding glutamate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher; Belongs to the glutamate synthase family. | 0.959 |
| APG08209.1 | APG09146.1 | BKD09_RS07705 | BKD09_RS12450 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
| APG08209.1 | APG14146.1 | BKD09_RS07705 | BKD09_RS37910 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.663 |
| APG08209.1 | cysC | BKD09_RS07705 | BKD09_RS45170 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.626 |
| APG08209.1 | eno | BKD09_RS07705 | BKD09_RS25575 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.919 |
| APG08209.1 | gcvP | BKD09_RS07705 | BKD09_RS20925 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.920 |
| APG08209.1 | gltD | BKD09_RS07705 | BKD09_RS07700 | Glutamate synthase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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