Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG07177.1 | APG08257.1 | BKD09_RS02440 | BKD09_RS07950 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.911 |
| APG07177.1 | APG09161.1 | BKD09_RS02440 | BKD09_RS12525 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | MCD, Malonyl-CoA decarboxylase MCD; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| APG07177.1 | APG10762.1 | BKD09_RS02440 | BKD09_RS20745 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.911 |
| APG07177.1 | APG11586.1 | BKD09_RS02440 | BKD09_RS24955 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APG07177.1 | APG12890.1 | BKD09_RS02440 | BKD09_RS31570 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | 0.911 |
| APG07177.1 | APG13589.1 | BKD09_RS02440 | BKD09_RS35065 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| APG07177.1 | APG13591.1 | BKD09_RS02440 | BKD09_RS35075 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| APG07177.1 | APG13919.1 | BKD09_RS02440 | BKD09_RS36770 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Aldehyde dehydrogenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APG07177.1 | APG14714.1 | BKD09_RS02440 | BKD09_RS40815 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.915 |
| APG07177.1 | APG15328.1 | BKD09_RS02440 | BKD09_RS44250 | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Start codon location was manually corrected by using GenomeMatcher. | 0.892 |
| APG08257.1 | APG07177.1 | BKD09_RS07950 | BKD09_RS02440 | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APG09161.1 | APG07177.1 | BKD09_RS12525 | BKD09_RS02440 | MCD, Malonyl-CoA decarboxylase MCD; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.890 |
| APG10762.1 | APG07177.1 | BKD09_RS20745 | BKD09_RS02440 | Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APG11586.1 | APG07177.1 | BKD09_RS24955 | BKD09_RS02440 | methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.900 |
| APG11586.1 | APG13589.1 | BKD09_RS24955 | BKD09_RS35065 | methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| APG11586.1 | APG13591.1 | BKD09_RS24955 | BKD09_RS35075 | methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.989 |
| APG12890.1 | APG07177.1 | BKD09_RS31570 | BKD09_RS02440 | Betaine-aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.911 |
| APG13589.1 | APG07177.1 | BKD09_RS35065 | BKD09_RS02440 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Catalyzes the formation of malonyl-CoA from malonate and CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.909 |
| APG13589.1 | APG11586.1 | BKD09_RS35065 | BKD09_RS24955 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.988 |
| APG13589.1 | APG13591.1 | BKD09_RS35065 | BKD09_RS35075 | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.999 |
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