Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG07867.1 | APG07868.1 | BKD09_RS05930 | BKD09_RS05935 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.577 |
| APG07867.1 | APG08452.1 | BKD09_RS05930 | BKD09_RS08930 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. | 0.433 |
| APG07867.1 | APG09288.1 | BKD09_RS05930 | BKD09_RS13170 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.516 |
| APG07867.1 | APG11757.1 | BKD09_RS05930 | BKD09_RS25815 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.508 |
| APG07867.1 | APG13072.1 | BKD09_RS05930 | BKD09_RS32480 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| APG07867.1 | def | BKD09_RS05930 | BKD09_RS05940 | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.436 |
| APG07868.1 | APG07867.1 | BKD09_RS05935 | BKD09_RS05930 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.577 |
| APG07868.1 | def | BKD09_RS05935 | BKD09_RS05940 | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | 0.561 |
| APG08452.1 | APG07867.1 | BKD09_RS08930 | BKD09_RS05930 | Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.433 |
| APG09288.1 | APG07867.1 | BKD09_RS13170 | BKD09_RS05930 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.516 |
| APG09288.1 | APG11757.1 | BKD09_RS13170 | BKD09_RS25815 | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.794 |
| APG11757.1 | APG07867.1 | BKD09_RS25815 | BKD09_RS05930 | Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.508 |
| APG11757.1 | APG09288.1 | BKD09_RS25815 | BKD09_RS13170 | Beta-hexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.794 |
| APG13072.1 | APG07867.1 | BKD09_RS32480 | BKD09_RS05930 | Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.403 |
| def | APG07867.1 | BKD09_RS05940 | BKD09_RS05930 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.436 |
| def | APG07868.1 | BKD09_RS05940 | BKD09_RS05935 | Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions. | DNA recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.561 |