Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG06790.1 | APG07406.1 | BKD09_RS00480 | BKD09_RS03605 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| APG06790.1 | APG08112.1 | BKD09_RS00480 | BKD09_RS07175 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
| APG06790.1 | APG08134.1 | BKD09_RS00480 | BKD09_RS07320 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.711 |
| APG06790.1 | APG08341.1 | BKD09_RS00480 | BKD09_RS08370 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.483 |
| APG06790.1 | APG08604.1 | BKD09_RS00480 | BKD09_RS09705 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.632 |
| APG06790.1 | APG11572.1 | BKD09_RS00480 | BKD09_RS24885 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | FkbM family methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.768 |
| APG06790.1 | APG14262.1 | BKD09_RS00480 | BKD09_RS38495 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.426 |
| APG06790.1 | APG14268.1 | BKD09_RS00480 | BKD09_RS38525 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.459 |
| APG06790.1 | id172 | BKD09_RS00480 | BKD09_RS43695 | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.458 |
| APG07406.1 | APG06790.1 | BKD09_RS03605 | BKD09_RS00480 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.402 |
| APG07406.1 | APG08112.1 | BKD09_RS03605 | BKD09_RS07175 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
| APG07406.1 | APG08134.1 | BKD09_RS03605 | BKD09_RS07320 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.748 |
| APG07406.1 | APG08341.1 | BKD09_RS03605 | BKD09_RS08370 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.659 |
| APG07406.1 | APG08604.1 | BKD09_RS03605 | BKD09_RS09705 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.597 |
| APG07406.1 | APG14262.1 | BKD09_RS03605 | BKD09_RS38495 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.762 |
| APG07406.1 | APG14268.1 | BKD09_RS03605 | BKD09_RS38525 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.538 |
| APG07406.1 | BKD09_RS19440 | BKD09_RS03605 | BKD09_RS19440 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.694 |
| APG07406.1 | id172 | BKD09_RS03605 | BKD09_RS43695 | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.545 |
| APG08112.1 | APG06790.1 | BKD09_RS07175 | BKD09_RS00480 | Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | RimK-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.642 |
| APG08112.1 | APG07406.1 | BKD09_RS07175 | BKD09_RS03605 | Amidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | LPS ABC transporter substrate-binding protein LptA; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.627 |
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