Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG09399.1 | APG09400.1 | BKD09_RS13730 | BKD09_RS13735 | HflK protein; HflC and HflK could encode or regulate a protease. | Protease modulator HflC; HflC and HflK could regulate a protease. | 0.999 |
| APG09399.1 | APG09402.1 | BKD09_RS13730 | BKD09_RS13745 | HflK protein; HflC and HflK could encode or regulate a protease. | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 0.575 |
| APG09399.1 | APG09495.1 | BKD09_RS13730 | BKD09_RS14220 | HflK protein; HflC and HflK could encode or regulate a protease. | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| APG09399.1 | miaA | BKD09_RS13730 | BKD09_RS13755 | HflK protein; HflC and HflK could encode or regulate a protease. | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.499 |
| APG09400.1 | APG09399.1 | BKD09_RS13735 | BKD09_RS13730 | Protease modulator HflC; HflC and HflK could regulate a protease. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.999 |
| APG09400.1 | APG09402.1 | BKD09_RS13735 | BKD09_RS13745 | Protease modulator HflC; HflC and HflK could regulate a protease. | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 0.599 |
| APG09400.1 | APG09495.1 | BKD09_RS13735 | BKD09_RS14220 | Protease modulator HflC; HflC and HflK could regulate a protease. | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.595 |
| APG09400.1 | miaA | BKD09_RS13735 | BKD09_RS13755 | Protease modulator HflC; HflC and HflK could regulate a protease. | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.492 |
| APG09402.1 | APG09399.1 | BKD09_RS13745 | BKD09_RS13730 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.575 |
| APG09402.1 | APG09400.1 | BKD09_RS13745 | BKD09_RS13735 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Protease modulator HflC; HflC and HflK could regulate a protease. | 0.599 |
| APG09402.1 | APG09495.1 | BKD09_RS13745 | BKD09_RS14220 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.779 |
| APG09402.1 | APG13516.1 | BKD09_RS13745 | BKD09_RS34700 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 0.910 |
| APG09402.1 | APG14146.1 | BKD09_RS13745 | BKD09_RS37910 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.603 |
| APG09402.1 | APG14155.1 | BKD09_RS13745 | BKD09_RS37955 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 0.911 |
| APG09402.1 | APG14586.1 | BKD09_RS13745 | BKD09_RS40150 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | Non-ribosomal peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.552 |
| APG09402.1 | miaA | BKD09_RS13745 | BKD09_RS13755 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family. | 0.576 |
| APG09402.1 | rpsA | BKD09_RS13745 | BKD09_RS03740 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | 30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence. | 0.630 |
| APG09402.1 | truA | BKD09_RS13745 | BKD09_RS05950 | Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family. | tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.574 |
| APG09495.1 | APG09399.1 | BKD09_RS14220 | BKD09_RS13730 | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | HflK protein; HflC and HflK could encode or regulate a protease. | 0.595 |
| APG09495.1 | APG09400.1 | BKD09_RS14220 | BKD09_RS13735 | AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Protease modulator HflC; HflC and HflK could regulate a protease. | 0.595 |
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