Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG07709.1 | APG09973.1 | BKD09_RS05130 | BKD09_RS16735 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APG08034.1 | APG09973.1 | BKD09_RS06780 | BKD09_RS16735 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.422 |
| APG08034.1 | tal | BKD09_RS06780 | BKD09_RS12370 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family. | 0.627 |
| APG09971.1 | APG09972.1 | BKD09_RS16725 | BKD09_RS16730 | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.776 |
| APG09971.1 | APG09973.1 | BKD09_RS16725 | BKD09_RS16735 | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| APG09971.1 | APG09974.1 | BKD09_RS16725 | BKD09_RS16740 | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.554 |
| APG09971.1 | APG09975.1 | BKD09_RS16725 | BKD09_RS16745 | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
| APG09971.1 | APG09976.1 | BKD09_RS16725 | BKD09_RS16750 | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.420 |
| APG09972.1 | APG09971.1 | BKD09_RS16730 | BKD09_RS16725 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.776 |
| APG09972.1 | APG09973.1 | BKD09_RS16730 | BKD09_RS16735 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.784 |
| APG09972.1 | APG09974.1 | BKD09_RS16730 | BKD09_RS16740 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.640 |
| APG09972.1 | APG09975.1 | BKD09_RS16730 | BKD09_RS16745 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.506 |
| APG09972.1 | APG09976.1 | BKD09_RS16730 | BKD09_RS16750 | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.561 |
| APG09973.1 | APG07709.1 | BKD09_RS16735 | BKD09_RS05130 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.532 |
| APG09973.1 | APG08034.1 | BKD09_RS16735 | BKD09_RS06780 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. | 0.422 |
| APG09973.1 | APG09971.1 | BKD09_RS16735 | BKD09_RS16725 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | C4-dicarboxylate transporter DctA; Involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.587 |
| APG09973.1 | APG09972.1 | BKD09_RS16735 | BKD09_RS16730 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.784 |
| APG09973.1 | APG09974.1 | BKD09_RS16735 | BKD09_RS16740 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.764 |
| APG09973.1 | APG09975.1 | BKD09_RS16735 | BKD09_RS16745 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.686 |
| APG09973.1 | APG09976.1 | BKD09_RS16735 | BKD09_RS16750 | 3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Start codon location was manually corrected by using GenomeMatcher. | 0.744 |
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