Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| APG11545.1 | APG14617.1 | BKD09_RS24735 | BKD09_RS40305 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
| APG11545.1 | APG15052.1 | BKD09_RS24735 | BKD09_RS42750 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Start codon location was manually corrected by using GenomeMatcher. | 0.617 |
| APG11545.1 | tatB | BKD09_RS24735 | BKD09_RS25835 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.534 |
| APG11545.1 | tatC | BKD09_RS24735 | BKD09_RS25840 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.551 |
| APG11977.1 | tatB | BKD09_RS26935 | BKD09_RS25835 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.534 |
| APG11977.1 | tatC | BKD09_RS26935 | BKD09_RS25840 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.551 |
| APG13367.1 | APG14274.1 | BKD09_RS33955 | BKD09_RS38555 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Cytochrome C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | 0.986 |
| APG13367.1 | tatA | BKD09_RS33955 | BKD09_RS25830 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.537 |
| APG13367.1 | tatB | BKD09_RS33955 | BKD09_RS25835 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.537 |
| APG13367.1 | tatC | BKD09_RS33955 | BKD09_RS25840 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.546 |
| APG14274.1 | APG13367.1 | BKD09_RS38555 | BKD09_RS33955 | Cytochrome C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.986 |
| APG14274.1 | tatC | BKD09_RS38555 | BKD09_RS25840 | Cytochrome C; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.662 |
| APG14617.1 | APG11545.1 | BKD09_RS40305 | BKD09_RS24735 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.411 |
| APG14617.1 | tatB | BKD09_RS40305 | BKD09_RS25835 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.534 |
| APG14617.1 | tatC | BKD09_RS40305 | BKD09_RS25840 | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.551 |
| APG15052.1 | APG11545.1 | BKD09_RS42750 | BKD09_RS24735 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Start codon location was manually corrected by using GenomeMatcher. | Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.617 |
| APG15052.1 | tatB | BKD09_RS42750 | BKD09_RS25835 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Start codon location was manually corrected by using GenomeMatcher. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.534 |
| APG15052.1 | tatC | BKD09_RS42750 | BKD09_RS25840 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Start codon location was manually corrected by using GenomeMatcher. | Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.551 |
| argS | tatA | BKD09_RS25805 | BKD09_RS25830 | arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system. | 0.536 |
| argS | tatB | BKD09_RS25805 | BKD09_RS25835 | arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation. | 0.444 |
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