Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
DVH24_013298 | DVH24_022138 | A0A498HKX6 | A0A498IX04 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
DVH24_013298 | DVH24_037354 | A0A498HKX6 | A0A498HFU5 | Uncharacterized protein. | TPX2 domain-containing protein. | 0.445 |
DVH24_013298 | psbH | A0A498HKX6 | A0A223A9T7 | Uncharacterized protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.782 |
DVH24_022138 | DVH24_013298 | A0A498IX04 | A0A498HKX6 | Uncharacterized protein. | Uncharacterized protein. | 0.991 |
DVH24_022138 | DVH24_037354 | A0A498IX04 | A0A498HFU5 | Uncharacterized protein. | TPX2 domain-containing protein. | 0.439 |
DVH24_022138 | psbH | A0A498IX04 | A0A223A9T7 | Uncharacterized protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.738 |
DVH24_037354 | DVH24_013298 | A0A498HFU5 | A0A498HKX6 | TPX2 domain-containing protein. | Uncharacterized protein. | 0.445 |
DVH24_037354 | DVH24_022138 | A0A498HFU5 | A0A498IX04 | TPX2 domain-containing protein. | Uncharacterized protein. | 0.439 |
DVH24_037354 | psbH | A0A498HFU5 | A0A223A9T7 | TPX2 domain-containing protein. | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | 0.444 |
psbH | DVH24_013298 | A0A223A9T7 | A0A498HKX6 | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | Uncharacterized protein. | 0.782 |
psbH | DVH24_022138 | A0A223A9T7 | A0A498IX04 | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | Uncharacterized protein. | 0.738 |
psbH | DVH24_037354 | A0A223A9T7 | A0A498HFU5 | Photosystem II reaction center protein H; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. | TPX2 domain-containing protein. | 0.444 |