STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_007358Uncharacterized protein. (313 aa)    
Predicted Functional Partners:
DVH24_018620
Uncharacterized protein.
    
   0.894
DVH24_001931
Uncharacterized protein.
    
   0.894
DVH24_031034
Uncharacterized protein.
  
 
   0.887
DVH24_007026
WD_REPEATS_REGION domain-containing protein.
    
   0.865
DVH24_040844
WD_REPEATS_REGION domain-containing protein.
    
   0.865
DVH24_003501
WD_REPEATS_REGION domain-containing protein.
    
   0.865
DVH24_004286
WD_REPEATS_REGION domain-containing protein.
    
   0.865
DVH24_029055
Tr-type G domain-containing protein.
    
   0.864
DVH24_036819
Uncharacterized protein.
    
   0.864
DVH24_036817
Uncharacterized protein.
    
   0.864
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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