Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_025547Uncharacterized protein. (714 aa)    
Predicted Functional Partners:
DVH24_032966
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
    
  0.772
DVH24_017592
Ubiquitin-like domain-containing protein.
    
  0.682
DVH24_011302
Cytochrome b561 domain-containing protein.
    
 0.678
DVH24_017466
Cytochrome b561 domain-containing protein.
    
 0.604
DVH24_012976
C3H1-type domain-containing protein.
      
 0.594
DVH24_014140
RING-type domain-containing protein.
    
  0.590
DVH24_026099
Zf-rbx1 domain-containing protein.
    
  0.590
DVH24_040182
Serine/threonine-protein phosphatase.
    
  0.512
DVH24_005160
Uncharacterized protein.
    
  0.477
DVH24_016417
Ribosomal_L18_c domain-containing protein.
     
  0.476
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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