STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_018655Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
DVH24_024617
Uncharacterized protein.
   
 
 0.989
DVH24_039003
TRASH domain-containing protein.
   
 
 0.970
DVH24_018798
Uncharacterized protein.
   
 
 0.965
DVH24_002071
Uncharacterized protein.
   
 
 0.965
DVH24_008547
WD_REPEATS_REGION domain-containing protein.
   
 
 0.959
DVH24_003335
Protein MAK16 homolog; Belongs to the MAK16 family.
   
   0.953
DVH24_004124
Ribosomal_L28e domain-containing protein.
   
   0.953
DVH24_003600
Brix domain-containing protein.
   
 
 0.946
DVH24_003173
Brix domain-containing protein.
   
 
 0.946
DVH24_023863
Brix domain-containing protein.
   
 
 0.926
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.