Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_018655Uncharacterized protein. (402 aa)    
Predicted Functional Partners:
DVH24_024617
Uncharacterized protein.
   
 
 0.986
DVH24_039003
TRASH domain-containing protein.
   
 
 0.966
DVH24_003335
Protein MAK16 homolog; Belongs to the MAK16 family.
   
 
 0.961
DVH24_004124
Ribosomal_L28e domain-containing protein.
   
 
 0.961
DVH24_028626
CP-type G domain-containing protein.
   
 
 0.956
DVH24_010413
CP-type G domain-containing protein.
   
 
 0.956
DVH24_016308
Uncharacterized protein.
   
 
 0.953
DVH24_016309
Uncharacterized protein.
   
 
 0.953
DVH24_033124
RRM domain-containing protein.
   
 
 0.953
DVH24_019115
Brix domain-containing protein.
   
 
 0.952
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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