STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_012694KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (626 aa)    
Predicted Functional Partners:
DVH24_036841
Pex2_Pex12 domain-containing protein.
    
 0.957
DVH24_036844
Pex2_Pex12 domain-containing protein.
    
 0.957
DVH24_033386
Pex2_Pex12 domain-containing protein.
    
 0.957
DVH24_033383
Uncharacterized protein.
    
 0.957
DVH24_030403
Uncharacterized protein.
    
 0.957
DVH24_035927
Uncharacterized protein.
    
 
 0.946
DVH24_041805
TPR_REGION domain-containing protein.
    
 0.942
DVH24_038306
TPR_REGION domain-containing protein.
    
 0.942
DVH24_039600
Pex14_N domain-containing protein.
    
 0.906
DVH24_032894
Uncharacterized protein.
    
 0.906
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.