STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_029297LRRNT_2 domain-containing protein. (777 aa)    
Predicted Functional Partners:
DVH24_040935
Uncharacterized protein.
    
 0.604
DVH24_038358
Uncharacterized protein.
   
   0.478
DVH24_019358
Uncharacterized protein.
   
   0.457
DVH24_000471
Uncharacterized protein.
   
   0.457
DVH24_025418
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
   0.440
DVH24_011355
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
   0.438
DVH24_037630
Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family.
    
 0.424
DVH24_030945
Uncharacterized protein.
    
 0.408
DVH24_007490
Uncharacterized protein.
    
 0.408
DVH24_040387
Uncharacterized protein.
    
 0.408
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.