STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_029327Uncharacterized protein. (774 aa)    
Predicted Functional Partners:
DVH24_015967
Protein kinase domain-containing protein.
    
 0.562
DVH24_030139
RNase III domain-containing protein.
    
 
 0.521
DVH24_014854
Uncharacterized protein.
    
 0.507
DVH24_035271
Uncharacterized protein.
    
 
0.503
DVH24_001772
Uncharacterized protein.
   
 
0.487
DVH24_031466
Uncharacterized protein.
      
 0.478
DVH24_018661
Uncharacterized protein.
    
 0.446
DVH24_001962
Uncharacterized protein.
    
 0.446
DVH24_013439
Uncharacterized protein.
   
 
0.430
DVH24_016600
Uncharacterized protein.
    
 0.427
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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