STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_029499KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family. (247 aa)    
Predicted Functional Partners:
DVH24_038358
Uncharacterized protein.
   
 0.991
DVH24_016417
Ribosomal_L18_c domain-containing protein.
  
 
 0.980
DVH24_027509
Uncharacterized protein.
   
 
 0.977
DVH24_024609
Ribosomal_S10 domain-containing protein.
  
 0.976
DVH24_011355
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL42 family.
   
 
 0.976
DVH24_025418
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 
 0.973
DVH24_005160
Uncharacterized protein.
   
 
 0.973
DVH24_004454
60S ribosomal protein L36; Belongs to the eukaryotic ribosomal protein eL36 family.
   
 
 0.973
DVH24_012961
Uncharacterized protein.
   
 0.963
DVH24_005659
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.962
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.