STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_012699Uncharacterized protein. (395 aa)    
Predicted Functional Partners:
DVH24_012918
Epimerase domain-containing protein.
      
 0.541
DVH24_020206
Epimerase domain-containing protein.
      
 0.541
DVH24_020204
NAD(P)-bd_dom domain-containing protein.
      
 0.541
DVH24_018505
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.534
MdF3H
Flavanone 3-hydroxylase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.534
DVH24_023723
Uncharacterized protein.
      
 0.532
DVH24_008935
Uncharacterized protein.
      
 0.532
DVH24_034264
Glycosyltransferase; Belongs to the UDP-glycosyltransferase family.
      
 0.518
DVH24_007939
Fe2OG dioxygenase domain-containing protein; Belongs to the iron/ascorbate-dependent oxidoreductase family.
      
 0.518
DVH24_021677
Uncharacterized protein.
      
 0.518
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.