STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_016769Uncharacterized protein. (1006 aa)    
Predicted Functional Partners:
DVH24_012024
Uncharacterized protein.
    
 
 0.746
DVH24_017759
Uncharacterized protein.
     
 0.688
DVH24_026867
Uncharacterized protein.
     
 0.688
DVH24_016443
Alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family.
      
 0.506
DVH24_010519
GST C-terminal domain-containing protein; Belongs to the GST superfamily.
      
 0.502
DVH24_005007
Nt_Gln_amidase domain-containing protein.
      
 0.473
DVH24_018870
Uncharacterized protein; Belongs to the OSBP family.
   
 
  0.469
DVH24_002128
Uncharacterized protein; Belongs to the OSBP family.
   
 
  0.469
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.