Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| DVH24_002202 | DVH24_014287 | A0A498I921 | A0A498JK58 | Sm domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.426 |
| DVH24_002202 | DVH24_014596 | A0A498I921 | A0A498KIB8 | Sm domain-containing protein. | Uncharacterized protein; Belongs to the DEAD box helicase family. | 0.426 |
| DVH24_002202 | DVH24_020030 | A0A498I921 | A0A498J8H7 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.999 |
| DVH24_002202 | DVH24_027116 | A0A498I921 | A0A498IQ74 | Sm domain-containing protein. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.999 |
| DVH24_002202 | DVH24_029728 | A0A498I921 | A0A498HZH0 | Sm domain-containing protein. | Uncharacterized protein. | 0.619 |
| DVH24_002202 | DVH24_035056 | A0A498I921 | A0A498IHL5 | Sm domain-containing protein. | Uncharacterized protein. | 0.822 |
| DVH24_002202 | DVH24_035175 | A0A498I921 | A0A498JAL4 | Sm domain-containing protein. | Uncharacterized protein. | 0.822 |
| DVH24_012921 | DVH24_027509 | A0A498HUQ8 | A0A498KU15 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Uncharacterized protein. | 0.999 |
| DVH24_012921 | DVH24_029728 | A0A498HUQ8 | A0A498HZH0 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Uncharacterized protein. | 0.696 |
| DVH24_012921 | DVH24_035056 | A0A498HUQ8 | A0A498IHL5 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Uncharacterized protein. | 0.620 |
| DVH24_012921 | DVH24_035175 | A0A498HUQ8 | A0A498JAL4 | 50S ribosomal protein L31; Belongs to the bacterial ribosomal protein bL31 family. | Uncharacterized protein. | 0.620 |
| DVH24_014287 | DVH24_002202 | A0A498JK58 | A0A498I921 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Sm domain-containing protein. | 0.426 |
| DVH24_014287 | DVH24_018944 | A0A498JK58 | A0A498HKZ6 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.426 |
| DVH24_014287 | DVH24_020030 | A0A498JK58 | A0A498J8H7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.483 |
| DVH24_014287 | DVH24_027116 | A0A498JK58 | A0A498IQ74 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.555 |
| DVH24_014287 | DVH24_029728 | A0A498JK58 | A0A498HZH0 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.659 |
| DVH24_014596 | DVH24_002202 | A0A498KIB8 | A0A498I921 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Sm domain-containing protein. | 0.426 |
| DVH24_014596 | DVH24_018944 | A0A498KIB8 | A0A498HKZ6 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Uncharacterized protein. | 0.426 |
| DVH24_014596 | DVH24_020030 | A0A498KIB8 | A0A498J8H7 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome. | 0.483 |
| DVH24_014596 | DVH24_027116 | A0A498KIB8 | A0A498IQ74 | Uncharacterized protein; Belongs to the DEAD box helicase family. | Small nuclear ribonucleoprotein Sm D1; Involved in splicing regulation. Facilitates post- transcriptional gene silencing (PTGS) by limiting the degradation of transgene aberrant RNAs by the RNA quality control (RQC) machinery, thus favoring their entry into cytoplasmic siRNA bodies where they can trigger PTGS. Does not participate in the production of small RNAs. Belongs to the snRNP core protein family. | 0.555 |
page 1 of 4