STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_019946Uncharacterized protein. (77 aa)    
Predicted Functional Partners:
DVH24_037666
Uncharacterized protein.
    
 0.982
DVH24_024823
Uncharacterized protein.
   
 0.982
DVH24_022489
Uncharacterized protein.
   
 0.982
DVH24_037653
CS domain-containing protein.
   
 0.847
DVH24_037805
CS domain-containing protein.
   
 0.847
DVH24_036782
ANK_REP_REGION domain-containing protein.
  
 0.803
DVH24_015353
Uncharacterized protein.
  
 0.803
DVH24_027944
OTU domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 0.761
DVH24_032563
OTU domain-containing protein; Belongs to the UDP-glycosyltransferase family.
   
 0.761
DVH24_030017
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 0.735
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.