STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_029892Uncharacterized protein. (600 aa)    
Predicted Functional Partners:
DVH24_019104
Uncharacterized protein.
   
 0.973
DVH24_035007
Uncharacterized protein.
   
 0.973
DVH24_009581
Uncharacterized protein.
   
 0.973
DVH24_038995
Uncharacterized protein.
   
 0.973
DVH24_001909
Uncharacterized protein.
  
  
0.947
DVH24_025224
Uncharacterized protein.
   
 
 0.905
DVH24_011535
Uncharacterized protein.
  
  
 
0.903
DVH24_017206
Uncharacterized protein.
  
  
 
0.902
DVH24_026452
Uncharacterized protein.
  
  
 
0.900
DVH24_014009
Uncharacterized protein.
  
 
0.835
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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