STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_042822Aa_trans domain-containing protein. (484 aa)    
Predicted Functional Partners:
DVH24_028059
Uncharacterized protein.
      
 0.501
DVH24_032453
Uncharacterized protein.
      
 0.501
DVH24_028058
Uncharacterized protein.
      
 0.451
DVH24_014722
Aa_trans domain-containing protein.
  
     0.448
DVH24_024281
Aa_trans domain-containing protein.
  
     0.446
DVH24_036100
Aa_trans domain-containing protein.
  
     0.441
LAX2
Aa_trans domain-containing protein.
  
     0.441
DVH24_006850
Aa_trans domain-containing protein.
  
     0.438
DVH24_034519
Aa_trans domain-containing protein.
  
     0.426
DVH24_042700
Aa_trans domain-containing protein.
  
     0.425
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.