STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DVH24_019863Remorin_C domain-containing protein. (203 aa)    
Predicted Functional Partners:
DVH24_029003
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.875
DVH24_017632
Uncharacterized protein; Belongs to the synaptobrevin family.
    
 0.875
DVH24_009121
Uncharacterized protein.
   
 0.864
DVH24_034671
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.835
DVH24_010103
Uncharacterized protein; Belongs to the STXBP/unc-18/SEC1 family.
   
 0.835
DVH24_024397
TPR_REGION domain-containing protein.
   
 0.825
DVH24_022891
TPR_REGION domain-containing protein.
   
 0.825
DVH24_012202
Uncharacterized protein; Belongs to the syntaxin family.
   
 0.814
DVH24_021009
Uncharacterized protein.
   
 0.814
DVH24_021010
t-SNARE coiled-coil homology domain-containing protein.
   
 0.814
Your Current Organism:
Malus domestica
NCBI taxonomy Id: 3750
Other names: M. domestica, Malus communis, Malus communis Desf., Malus domestica Borkh., nom. cons. prop., Malus pumila auct., Malus pumila var. domestica, Malus pumila var. domestica (Borkh.) C.K.Schneid., Malus sylvestris var. domestica, Malus sylvestris var. domestica (Borkh.) Mansf., Malus x domestica, Pyrus malus, Pyrus malus L., apple, apple tree, cultivated apple
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.